本文整理了Java中edu.isi.karma.modeling.alignment.Alignment类的一些代码示例，展示了Alignment类的具体用法。这些代码示例主要来源于Github/Stackoverflow/Maven等平台，是从一些精选项目中提取出来的代码，具有较强的参考意义，能在一定程度帮忙到你。Alignment类的具体详情如下：
包路径：edu.isi.karma.modeling.alignment.Alignment
类名称：Alignment
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代码示例来源：origin: usc-isi-i2/Web-Karma
System.out.println(s);
Alignment al = new Alignment(mgr);
ColumnNode c1 = al.addColumnNode("h1", "c1", null, null);
ColumnNode c2 = al.addColumnNode("h2", "c2", null, null);
InternalNode n1 = al.addInternalNode(new Label("http://example.com/layout/C01_"));
InternalNode n2 = al.addInternalNode(new Label("http://example.com/layout/C02_"));
al.addDataPropertyLink(n1, c1, new Label("http://example.com/layout/d1"), false);
al.addDataPropertyLink(n2, c2, new Label("http://example.com/layout/d2"), false);
al.align();
System.out.println(GraphUtil.labeledGraphToString(al.getSteinerTree()));
} else {
logger.info("No directory for preloading ontologies exists.");代码示例来源：origin: usc-isi-i2/Web-Karma
public Set<LabeledLink> getCurrentIncomingLinksToNode(String nodeId) {
Node node = this.getNodeById(nodeId);
if (node == null)
return null;
return this.graphBuilder.getIncomingLinksMap().get(nodeId);
}代码示例来源：origin: usc-isi-i2/Web-Karma
if(alignment == null || alignment.isEmpty()) {
logger.error("Alignment cannot be null before calling this command since the alignment is created while " +
"setting the semantic types.");
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>)alignment.getGraph().clone();
Set<LabeledLink> currentLinks = alignment.getCurrentIncomingLinksToNode(LinkIdFactory.getLinkTargetId(edgeId));
if (currentLinks != null && !currentLinks.isEmpty()) {
for (LabeledLink currentLink: currentLinks) {
alignment.changeLinkStatus(currentLink.getId(), LinkStatus.Normal);
alignment.changeLinkStatus(edgeId, LinkStatus.ForcedByUser);
if(!this.isExecutedInBatch())
alignment.align();代码示例来源：origin: usc-isi-i2/Web-Karma
public void deleteForcedInternalNode(String nodeId) {
Node node = getNodeById(nodeId);
if(node != null) {
this.removeNode(nodeId);
// if (this.graphBuilder.removeNode(node))
// this.steinerTree.removeVertex(node);
}
}代码示例来源：origin: usc-isi-i2/Web-Karma
private void addProvenaceLinks(Alignment alignment, Label linkLabel, LiteralNode targetNode) {
String targetId = targetNode.getId();
Set<Node> internalNodes = alignment.getNodesByType(NodeType.InternalNode);
String edgeUri = linkLabel.getUri();
for(Node internalNode : internalNodes) {
String nodeId = internalNode.getId();
Set<LabeledLink> inLinks = alignment.getIncomingLinksInTree(nodeId);
Set<LabeledLink> outLinks = alignment.getOutgoingLinksInTree(nodeId);
if((inLinks != null && inLinks.size() > 0)
|| (outLinks != null && outLinks.size() > 0)) {
String linkId = LinkIdFactory.getLinkId(edgeUri, nodeId, targetId);
LabeledLink link = alignment.getLinkById(linkId);
if(link == null) {
link = alignment.addObjectPropertyLink(internalNode,
targetNode, linkLabel);
alignment.changeLinkStatus(linkId, LinkStatus.ForcedByUser);
link.setProvenance(true, false);
}
}
}
}代码示例来源：origin: usc-isi-i2/Web-Karma
@SuppressWarnings("unchecked")
@Override
public UpdateContainer doIt(Workspace workspace) throws CommandException {
logCommand(logger, workspace);
Alignment alignment = AlignmentManager.Instance().getAlignment(
alignmentId);
// Save the original alignment for undo
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>) alignment
.getGraph().clone();
try {
alignment.deleteForcedInternalNode(nodeId);
if(!this.isExecutedInBatch())
alignment.align();
} catch (JSONException e) {
logger.error("Error adding Internal Node:" , e);
}
return WorksheetUpdateFactory.createSemanticTypesAndSVGAlignmentUpdates(worksheetId, workspace);
}代码示例来源：origin: usc-isi-i2/Web-Karma
Alignment alignment = AlignmentManager.Instance().getAlignment(alignmentId);
if (alignment == null) {
alignment = new Alignment(ontMgr);
AlignmentManager.Instance().addAlignmentToMap(alignmentId, alignment);
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>)alignment.getGraph().clone();
ColumnNode columnNode = alignment.getColumnNodeByHNodeId(hNodeId);
columnNode.setRdfLiteralType(rdfLiteralType);
columnNode.setLanguage(language);
List<LabeledLink> columnNodeIncomingLinks = alignment.getGraphBuilder().getIncomingLinks(columnNode.getId());
if (columnNodeIncomingLinks != null) {
for(LabeledLink oldIncomingLinkToColumnNode : columnNodeIncomingLinks) {
Node oldDomainNode = oldIncomingLinkToColumnNode.getSource();
alignment.removeLink(oldIncomingLinkToColumnNode.getId());
if (alignment.isNodeIsolatedInTree(oldDomainNode.getId()))
alignment.removeNode(oldDomainNode.getId());
Set<Node> internalNodes = alignment.getNodesByType(NodeType.InternalNode);
if(internalNodes != null) {
for(Node internalNode : internalNodes) {
String nodeId = internalNode.getId();
Set<LabeledLink> inLinks = alignment.getIncomingLinksInTree(nodeId);
Set<LabeledLink> outLinks = alignment.getOutgoingLinksInTree(nodeId);
if((inLinks != null && inLinks.size() > 0)
|| (outLinks != null && outLinks.size() > 0)) {代码示例来源：origin: usc-isi-i2/Web-Karma
alignmentId);
if (alignment == null) {
alignment = new Alignment(ontMgr);
AlignmentManager.Instance().addAlignmentToMap(alignmentId, alignment);
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>) alignment
.getGraph().clone();
ColumnNode columnNode = alignment.getColumnNodeByHNodeId(hNodeId);
columnNode.setRdfLiteralType(rdfLiteralType);
columnNode.setLanguage(language);
List<LabeledLink> columnNodeIncomingLinks = alignment.getGraphBuilder().getIncomingLinks(columnNode.getId());
if (columnNodeIncomingLinks != null) {
for(LabeledLink oldIncomingLinkToColumnNode : columnNodeIncomingLinks) {
Node oldDomainNode = oldIncomingLinkToColumnNode.getSource();
alignment.removeLink(oldIncomingLinkToColumnNode.getId());
if (alignment.isNodeIsolatedInTree(oldDomainNode.getId()))
alignment.removeNode(oldDomainNode.getId());
Node classNode = alignment.getNodeById(metaPropertyId);
classNode = alignment.addInternalNode((InternalNode)classNode);
LabeledLink newLink = alignment.addClassInstanceLink(classNode, columnNode,
LinkKeyInfo.UriOfInstance);
alignment.changeLinkStatus(newLink.getId(),
LinkStatus.ForcedByUser);代码示例来源：origin: usc-isi-i2/Web-Karma
initialAlignment = alignment.getAlignmentClone();
initialGraph = (DirectedWeightedMultigraph<Node, DefaultLink>)alignment.getGraph().clone();
continue;
ColumnNode cn = alignment.getColumnNodeByHNodeId(hNodeId);
alignment.setGraph(initialGraph);
if(!this.isExecutedInBatch())
alignment.align();
AlignmentManager.Instance().addAlignmentToMap(alignmentId, alignment);
steinerNodes = alignment.computeSteinerNodes();
ModelLearner modelLearner;
modelLearner = new ModelLearner(alignment.getGraphBuilder(), steinerNodes);
else
modelLearner = new ModelLearner(ontologyManager, alignment.getLinksByStatus(LinkStatus.ForcedByUser), steinerNodes);
alignment.updateAlignment(model, semanticTypes);
logger.info(GraphUtil.labeledGraphToString(alignment.getSteinerTree()));代码示例来源：origin: usc-isi-i2/Web-Karma
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>)alignment.getGraph().clone();
ColumnNode columnNode = alignment.getColumnNodeByHNodeId(hNodeId);
Set<LabeledLink> alignmentEdges = alignment.getCurrentIncomingLinksToNode(hNodeId);
for(LabeledLink edge: alignmentEdges) {
String linkId = edge.getId();
columnNode.setForced(false);
LabeledLink currentLink = alignment.getLinkById(linkId);
alignment.removeLink(linkId);
Node domain = currentLink.getSource();
if (domain != null) {
String domainId = domain.getId();
if (alignment.isNodeIsolatedInTree(domainId))
alignment.removeNode(domainId);
alignment.align();代码示例来源：origin: usc-isi-i2/Web-Karma
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>) alignment
.getGraph().clone();
OntologyManager ontMgr = workspace.getOntologyManager();
nodeId = nodeUri + (alignment.getLastIndexOfNodeUri(nodeUri) + 1);
Node addedNode = alignment.addInternalNode(node);
if (addedNode != null)
alignment.addToForcedNodes(addedNode);
if(!this.isExecutedInBatch())
alignment.align();代码示例来源：origin: usc-isi-i2/Web-Karma
Alignment alignment = AlignmentManager.Instance().getAlignment(alignmentId);
if (alignment == null) {
alignment = new Alignment(ontMgr);
AlignmentManager.Instance().addAlignmentToMap(alignmentId, alignment);
Node classNode = alignment.addInternalNode(internalNodeLabel);
for (HNode hNode : sortedLeafHNodes){
String columnName = hNode.getColumnName().trim().replaceAll(" ", "_");
ColumnNode columnNode = alignment.getColumnNodeByHNodeId(hNode.getId());
List<LabeledLink> columnNodeIncomingLinks = alignment.getGraphBuilder().getIncomingLinks(columnNode.getId());
if (columnNodeIncomingLinks == null || columnNodeIncomingLinks.isEmpty()) { // SemanticType not yet assigned
Label propertyLabel = new Label(ns + columnName, ns, "karma");
alignment.addDataPropertyLink(classNode, columnNode, propertyLabel, false);
alignment.align();代码示例来源：origin: usc-isi-i2/Web-Karma
if (alignment != null && !alignment.isEmpty()) {
for (Node node: alignment.getSteinerTree().vertexSet()) {
if (node.getType() == NodeType.InternalNode) {
steinerTreeNodeIds.add(node.getId());
clazzLocalNameWithPrefix = domainURI.getUri() + "/" + domainURI.getLocalName();
int graphLastIndex = alignment.getLastIndexOfNodeUri(domainURI.getUri());
if (graphLastIndex == -1) { // No instance present in the graph
insertSemanticTypeSuggestion(arr, clazzLocalNameWithPrefix + "1 (add)",
hasLastNodeFromSteinerTree = true;
} else {
Node graphNode = alignment.getNodeById(domainURI.getUri() + i);
if (graphNode != null)
insertSemanticTypeSuggestion(arr, clazzLocalNameWithPrefix + i + " (add)",
int graphLastIndex = alignment.getLastIndexOfNodeUri(typeURI.getUri());
if (graphLastIndex == -1) { // No instance present in the graph
insertSemanticTypeSuggestion(arr, "", "", "", clazzLocalNameWithPrefix + "1 (add)",
typeURI.getUri(), typeURI.getUri() + i, probability);
} else {
Node graphNode = alignment.getNodeById(typeURI.getUri() + i);
if (graphNode != null)
insertSemanticTypeSuggestion(arr, "", "", "", clazzLocalNameWithPrefix + i + " (add)",代码示例来源：origin: usc-isi-i2/Web-Karma
private Map<Node,Boolean> getClassesInModel(Workspace workspace) {
final Alignment alignment = AlignmentManager.Instance().getAlignment(
workspace.getId(), worksheetId);
Map<Node,Boolean> nodeSet = new HashMap<>();
Set<Node> treeNodes = alignment.getSteinerTree().vertexSet();
if (treeNodes != null) {
for (Node n : treeNodes) {
nodeSet.put(n, true);
}
}
return nodeSet;
}代码示例来源：origin: usc-isi-i2/Web-Karma
if (alignment != null && !alignment.isEmpty()) {
for (Node node: alignment.getSteinerTree().vertexSet()) {
if (node.getType() == NodeType.InternalNode) {
steinerTreeNodeIds.add(node.getId());
graphLastIndex = alignment.getLastIndexOfNodeUri(nodeUri);
Set<Node> graphNodes = alignment.getNodesByUri(nodeUri);
if (graphNodes != null && !graphNodes.isEmpty()) {
for (Node graphNode: graphNodes) {代码示例来源：origin: usc-isi-i2/Web-Karma
@SuppressWarnings("unchecked")
@Override
public UpdateContainer doIt(Workspace workspace) throws CommandException {
Alignment alignment = AlignmentManager.Instance().getAlignment(
alignmentId);
OntologyManager ontMgr = workspace.getOntologyManager();
// Save the original alignment for undo
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>) alignment
.getGraph().clone();
UpdateContainer uc = this.deleteLink(alignment, ontMgr, edge);
if(!this.isExecutedInBatch())
alignment.align();
uc.append(this.computeAlignmentAndSemanticTypesAndCreateUpdates(workspace));
return uc;
}代码示例来源：origin: usc-isi-i2/Web-Karma
oldAlignment = alignment.getAlignmentClone();
oldGraph = (DirectedWeightedMultigraph<Node, DefaultLink>) alignment
.getGraph().clone();
final LiteralNode ln = alignment.addLiteralNode(literalValue, literalType, language, isUri);
nodeId = ln.getId();
alignment.updateLiteralNode(nodeId, literalValue, literalType, language, isUri);
alignment.align();代码示例来源：origin: usc-isi-i2/Web-Karma
Alignment alignment = AlignmentManager.Instance().getAlignment(workspace.getId(), worksheetId);
Set<String> steinerTreeNodeIds = new HashSet<>();
if (alignment != null && !alignment.isEmpty()) {
DirectedWeightedMultigraph<Node, LabeledLink> steinerTree = alignment.getSteinerTree();
for (Node node: steinerTree.vertexSet()) {
if (node.getType() == NodeType.InternalNode) {
temp = alignment.getLinksByType(LinkType.DataPropertyLink);
if (temp != null) specializedLinks.addAll(temp);
for (LabeledLink link:steinerTree.edgeSet())
properties.addAll(alignment.suggestAlternativeLinks(linkId));代码示例来源：origin: usc-isi-i2/Web-Karma
if (alignment.getSteinerTree() != null) {
for (LabeledLink link : alignment.getSteinerTree().edgeSet()) {
if ((link.getStatus() == LinkStatus.Normal || link.getStatus() == LinkStatus.PreferredByUI) && (link.getType() == LinkType.ObjectPropertyLink)) {
links.add(link);
Set<Node> nodes = alignment.getSteinerTree().vertexSet();
boolean linksRemoved = false;
for (Node node:nodes) {
if (node instanceof InternalNode) {
Set<LabeledLink> outLinks = alignment.getOutgoingLinksInTree(node.getId());
if(outLinks != null && outLinks.size() > 0) {
boolean hasProvLink = false;
alignment.removeLink(linkId);
linksRemoved = true;
SemanticModel semanticModel = new SemanticModel(workspace, worksheet, worksheetName, alignment.getSteinerTree(), selection);
semanticModel.setName(worksheetName);
try {代码示例来源：origin: usc-isi-i2/Web-Karma
Node n = this.getNodeById(nodeId);
if (n == null) {
logger.error("could not find the node " + nodeId + " in the model.");
currentIncomingLinks = this.getIncomingLinksInTree(nodeId);
currentOutgoingLinks = this.getOutgoingLinksInTree(nodeId);
if (currentIncomingLinks != null)
for (LabeledLink l : currentIncomingLinks)
for (LabeledLink e : this.steinerTree.edgeSet()) {
LabeledLink l = this.getLinkById(e.getId());内容来源于网络，如有侵权，请联系作者删除！