java.lang.string不是string架构的有效外部类型

hrirmatl  于 2021-05-27  发布在  Spark
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我正试图将一些csv数据加载到spark集群中并对其运行一些查询,但在加载数据时遇到了问题。
请参阅下面的代码示例-我已经生成了一个头并尝试解析列,但在对(大型、列丰富的)数据集运行时,进程失败,错误消息为:“java.lang.string不是string架构的有效外部类型”
这似乎在互联网上的其他地方没有得到解决——有人知道问题可能是什么吗?
(我最初认为这可能与加载null或空字段有关,但该过程在一段时间后失败,并且源数据非常稀疏)

var headers = StructType(header_clean.split(",").map(fieldName ⇒ StructField(fieldName, StringType, true)))
var contentRdd = contentNoHeader.map(k => k.split(",")).map(
    p => Row(p.map( x => x.replace("\"", "").trim)))

contentRdd.createOrReplaceTempView("someView")

val domains = spark.sql("SELECT DISTINCT domain FROM someView")

作为参考,错误日志的底部(非常垃圾,很多列

if (assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object).isNullAt) null else staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object), 87, pageUrl), StringType), true) AS pageUrl#377
+- if (assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object).isNullAt) null else staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object), 87, pageUrl), StringType), true)    :- assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object).isNullAt    :  :- assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object)    :  :  +- input[0, org.apache.spark.sql.Row, true]    : 
+- 87    :- null    +- staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object), 87, pageUrl), StringType), true)
      +- validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object), 87, pageUrl), StringType)
         +- getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object), 87, pageUrl)
            +- assertnotnull(input[0, org.apache.spark.sql.Row, true], top level row object)
               +- input[0, org.apache.spark.sql.Row, true]   at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.toRow(ExpressionEncoder.scala:279) at org.apache.spark.sql.SparkSession$$anonfun$5.apply(SparkSession.scala:537) at org.apache.spark.sql.SparkSession$$anonfun$5.apply(SparkSession.scala:537) at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)   at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)   at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.agg_doAggregateWithKeys$(Unknown Source)   at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)   at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43) at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:370) at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)   at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:125) at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:79) at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:47) at org.apache.spark.scheduler.Task.run(Task.scala:85)   at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:274)  ... 3 more Caused by: java.lang.RuntimeException: [Ljava.lang.String; is not a valid external type for schema of string   at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply_0$(Unknown Source)   at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown Source)   at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.toRow(ExpressionEncoder.scala:276) ... 17 more
lbsnaicq

lbsnaicq1#

我通过拆分行的元素来解决这个问题。您可以这样做:

StructType(header_clean.split(",").map(fieldName ⇒StructField(fieldName, StringType, true)))
var contentRdd = contentNoHeader.map(k => k.split(",")).map(
p => {
  val ppp = p.map( x => x.replace("\"", "").trim)
  Row(ppp(0),ppp(1),ppp(2))
})

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