如何解决clickhouse死锁?

zqry0prt  于 2021-07-15  发布在  ClickHouse
关注(0)|答案(1)|浏览(2220)

当clickhouse陷入僵局时,我正在做一组10个并发测试。
以下sql

select
id,
sum(a) as a,
sum(b) as b,
sum(c) as c,
round(sum(d), 2) as d
from f_table
where xxx

我跑了 pstack my-clickhouse-server-process-id 还有一些 __lll_lock_wait .
很抱歉发布了这么多线程堆栈日志,我想更多的信息可能会给你一些想法。由于这个复制目前并不稳定,所以我还没有在github的问题上发布它。我读过https://github.com/clickhouse/clickhouse/issues/4316 但我真的不确定这个修复方案取得了什么效果。我现在的版本是 19.14.7.15 .
以下是一些典型的堆栈:

Thread 1278 (Thread 0x7f89a23c6700 (LWP 18345)):

# 0  0x00007f89a8b944ed in __lll_lock_wait () from /lib64/libpthread.so.0

# 1  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 2  0x000055dc6dd3c87f in ?? ()

# 3  0x000055dc6dd35393 in unw_step ()

# 4  0x000055dc6dd354b0 in unw_backtrace ()

# 5  0x000055dc68058221 in StackTrace::StackTrace(ucontext_t const&) ()

# 6  0x000055dc6806c91e in ?? ()

# 7  <signal handler called>

# 8  0x000055dc6b87d21d in ?? ()

# 9  0x000055dc6b87da1e in LZ4::decompress(char const*, char*, unsigned long, unsigned long, LZ4::PerformanceStatistics&) ()

# 10 0x000055dc6b184eb6 in DB::ICompressionCodec::decompress(char const*, unsigned int, char*) const ()

# 11 0x000055dc6b17dd37 in DB::CompressedReadBufferBase::decompress(char*, unsigned long, unsigned long) ()

# 12 0x000055dc6b8544b5 in DB::CompressedReadBufferFromFile::nextImpl() ()

# 13 0x000055dc6b854609 in DB::CompressedReadBufferFromFile::seek(unsigned long, unsigned long) ()

# 14 0x000055dc6b6519c8 in DB::MergeTreeReaderStream::seekToMark(unsigned long) ()

# 15 0x000055dc6bb1d637 in ?? ()

# 16 0x000055dc681ecc78 in DB::IDataType::deserializeBinaryBulkWithMultipleStreams(DB::IColumn&, unsigned long, DB::IDataType::DeserializeBinaryBulkSettings&, std::shared_ptr<DB::IDataType::DeserializeBinaryBulkState>&) const ()

# 17 0x000055dc6bb1f64c in DB::MergeTreeReader::readData(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, DB::IDataType const&, DB::IColumn&, unsigned long, bool, unsigned long, bool) ()

# 18 0x000055dc6bb1fdfb in DB::MergeTreeReader::readRows(unsigned long, bool, unsigned long, DB::Block&) ()

# 19 0x000055dc6bb197be in DB::MergeTreeRangeReader::DelayedStream::finalize(DB::Block&) ()

# 20 0x000055dc6bb1b988 in DB::MergeTreeRangeReader::continueReadingChain(DB::MergeTreeRangeReader::ReadResult&) ()

# 21 0x000055dc6bb1c1ae in DB::MergeTreeRangeReader::read(unsigned long, std::vector<DB::MarkRange, std::allocator<DB::MarkRange> >&) ()

# 22 0x000055dc6baec6d3 in DB::MergeTreeBaseSelectBlockInputStream::readFromPartImpl() ()

# 23 0x000055dc6baed1a5 in DB::MergeTreeBaseSelectBlockInputStream::readImpl() ()

# 24 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 25 0x000055dc6b8bf6c6 in DB::FilterBlockInputStream::readImpl() ()

# 26 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 27 0x000055dc6b8b81ef in DB::ExpressionBlockInputStream::readImpl() ()

# 28 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 29 0x000055dc6b8f1b9a in DB::ParallelInputsProcessor<DB::ParallelAggregatingBlockInputStream::Handler>::thread(std::shared_ptr<DB::ThreadGroupStatus>, unsigned long) ()

# 30 0x000055dc6b8f265d in _ZZN20ThreadFromGlobalPoolC4IMN2DB23ParallelInputsProcessorINS1_35ParallelAggregatingBlockInputStream7HandlerEEEFvSt10shared_ptrINS1_17ThreadGroupStatusEEmEJPS5_S8_RmEEEOT_DpOT0_ENKUlvE_clEv ()

# 31 0x000055dc6809338c in ThreadPoolImpl<std::thread>::worker(std::_List_iterator<std::thread>) ()

# 32 0x000055dc6dd01b60 in ?? ()

# 33 0x00007f89a8b8ddd5 in start_thread () from /lib64/libpthread.so.0

# 34 0x00007f89a84ab02d in clone () from /lib64/libc.so.6

Thread 1231 (Thread 0x7f897ebff700 (LWP 18392)):

# 0  0x00007f89a8b944ed in __lll_lock_wait () from /lib64/libpthread.so.0

# 1  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 2  0x000055dc6dd3c87f in ?? ()

# 3  0x000055dc6dd35393 in unw_step ()

# 4  0x000055dc6dd354b0 in unw_backtrace ()

# 5  0x000055dc68058221 in StackTrace::StackTrace(ucontext_t const&) ()

# 6  0x000055dc6806c91e in ?? ()

# 7  <signal handler called>

# 8  0x00007f89a8b91963 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0

# 9  0x000055dc6dc8dc0c in std::condition_variable::wait(std::unique_lock<std::mutex>&) ()

# 10 0x000055dc6d527cab in Poco::Event::wait() ()

# 11 0x000055dc6b8ef2fa in DB::ParallelInputsProcessor<DB::ParallelAggregatingBlockInputStream::Handler>::wait() ()

# 12 0x000055dc6b8eaff8 in DB::ParallelAggregatingBlockInputStream::execute() ()

# 13 0x000055dc6b8ee7e0 in DB::ParallelAggregatingBlockInputStream::readImpl() ()

# 14 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 15 0x000055dc6b18a15b in DB::AsynchronousBlockInputStream::calculate() ()

# 16 0x000055dc6b18a520 in ?? ()

# 17 0x000055dc680958de in ThreadPoolImpl<ThreadFromGlobalPool>::worker(std::_List_iterator<ThreadFromGlobalPool>) ()

# 18 0x000055dc68095eee in _ZZN20ThreadFromGlobalPoolC4IZN14ThreadPoolImplIS_E12scheduleImplIvEET_St8functionIFvvEEiSt8optionalImEEUlvE1_JEEEOS4_DpOT0_ENKUlvE_clEv ()

# 19 0x000055dc6809338c in ThreadPoolImpl<std::thread>::worker(std::_List_iterator<std::thread>) ()

# 20 0x000055dc6dd01b60 in ?? ()

# 21 0x00007f89a8b8ddd5 in start_thread () from /lib64/libpthread.so.0

# 22 0x00007f89a84ab02d in clone () from /lib64/libc.so.6

Thread 1203 (Thread 0x7f8969ff9700 (LWP 18420)):

# 0  0x00007f89a8b944ed in __lll_lock_wait () from /lib64/libpthread.so.0

# 1  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 2  0x000055dc6dd3c87f in ?? ()

# 3  0x000055dc6dd35393 in unw_step ()

# 4  0x000055dc6dd354b0 in unw_backtrace ()

# 5  0x000055dc68058221 in StackTrace::StackTrace(ucontext_t const&) ()

# 6  0x000055dc6806c91e in ?? ()

# 7  <signal handler called>

# 8  0x00007f89a8b944eb in __lll_lock_wait () from /lib64/libpthread.so.0

# 9  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 10 0x000055dc6dd3c87f in ?? ()

# 11 0x000055dc6dd35393 in unw_step ()

# 12 0x000055dc6dd354b0 in unw_backtrace ()

# 13 0x000055dc68058221 in StackTrace::StackTrace(ucontext_t const&) ()

# 14 0x000055dc6806c91e in ?? ()

# 15 <signal handler called>

# 16 0x000055dc68bb02ee in DB::NumComparisonImpl<long, unsigned int, DB::EqualsOp<long, unsigned int> >::vector_constant(DB::PODArray<long, 4096ul, Allocator<false, false>, 15ul, 16ul> const&, unsigned int, DB::PODArray<unsigned char, 4096ul, Allocator<false, false>, 15ul, 16ul>&) ()

# 17 0x000055dc68be2aac in bool DB::FunctionComparison<DB::EqualsOp, DB::NameEquals>::executeNumLeftType<long>(DB::Block&, unsigned long, DB::IColumn const*, DB::IColumn const*) ()

# 18 0x000055dc68cb9496 in DB::FunctionComparison<DB::EqualsOp, DB::NameEquals>::executeImpl(DB::Block&, std::vector<unsigned long, std::allocator<unsigned long> > const&, unsigned long, unsigned long) ()

# 19 0x000055dc6b8329e4 in DB::PreparedFunctionImpl::execute(DB::Block&, std::vector<unsigned long, std::allocator<unsigned long> > const&, unsigned long, unsigned long, bool) ()

# 20 0x000055dc6ba20231 in DB::ExpressionAction::execute(DB::Block&, bool) const ()

# 21 0x000055dc6ba21945 in DB::ExpressionActions::execute(DB::Block&, bool) const ()

# 22 0x000055dc6b8bfa08 in DB::FilterBlockInputStream::readImpl() ()

# 23 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 24 0x000055dc6b8b81ef in DB::ExpressionBlockInputStream::readImpl() ()

# 25 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 26 0x000055dc6b8f1b9a in DB::ParallelInputsProcessor<DB::ParallelAggregatingBlockInputStream::Handler>::thread(std::shared_ptr<DB::ThreadGroupStatus>, unsigned long) ()

# 27 0x000055dc6b8f265d in _ZZN20ThreadFromGlobalPoolC4IMN2DB23ParallelInputsProcessorINS1_35ParallelAggregatingBlockInputStream7HandlerEEEFvSt10shared_ptrINS1_17ThreadGroupStatusEEmEJPS5_S8_RmEEEOT_DpOT0_ENKUlvE_clEv ()

# 28 0x000055dc6809338c in ThreadPoolImpl<std::thread>::worker(std::_List_iterator<std::thread>) ()

# 29 0x000055dc6dd01b60 in ?? ()

# 30 0x00007f89a8b8ddd5 in start_thread () from /lib64/libpthread.so.0

# 31 0x00007f89a84ab02d in clone () from /lib64/libc.so.6

Thread 1202 (Thread 0x7f89697f8700 (LWP 18421)):

# 0  0x00007f89a8b944ed in __lll_lock_wait () from /lib64/libpthread.so.0

# 1  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 2  0x000055dc6dd3c87f in ?? ()

# 3  0x000055dc6dd35393 in unw_step ()

# 4  0x000055dc6dd354b0 in unw_backtrace ()

# 5  0x000055dc680581e0 in StackTrace::StackTrace() ()

# 6  0x000055dc6b287535 in DB::Context::getTable(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const ()

# 7  0x000055dc6b2d32dc in DB::InterpreterInsertQuery::getTable(DB::ASTInsertQuery const&) ()

# 8  0x000055dc6b2d3ce7 in DB::InterpreterInsertQuery::execute() ()

# 9  0x000055dc680b807a in DB::SystemLog<DB::QueryLogElement>::flushImpl(DB::SystemLog<DB::QueryLogElement>::EntryType) ()

# 10 0x000055dc680b87f2 in DB::SystemLog<DB::QueryLogElement>::threadFunction() ()

# 11 0x000055dc680b938a in _ZZN20ThreadFromGlobalPoolC4IZN2DB9SystemLogINS1_15QueryLogElementEEC4ERNS1_7ContextERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESE_SE_mEUlvE_JEEEOT_DpOT0_ENKUlvE_clEv ()

# 12 0x000055dc6809338c in ThreadPoolImpl<std::thread>::worker(std::_List_iterator<std::thread>) ()

# 13 0x000055dc6dd01b60 in ?? ()

# 14 0x00007f89a8b8ddd5 in start_thread () from /lib64/libpthread.so.0

# 15 0x00007f89a84ab02d in clone () from /lib64/libc.so.6

Thread 1175 (Thread 0x7f888a1f3700 (LWP 18449)):

# 0  0x00007f89a8b944ed in __lll_lock_wait () from /lib64/libpthread.so.0

# 1  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 2  0x000055dc6dd3c87f in ?? ()

# 3  0x000055dc6dd35393 in unw_step ()

# 4  0x000055dc6dd354b0 in unw_backtrace ()

# 5  0x000055dc68058221 in StackTrace::StackTrace(ucontext_t const&) ()

# 6  0x000055dc6806c91e in ?? ()

# 7  <signal handler called>

# 8  0x00007f89a84ab603 in epoll_wait () from /lib64/libc.so.6

# 9  0x000055dc6bea48b6 in Poco::Net::SocketImpl::poll(Poco::Timespan const&, int) ()

# 10 0x000055dc6bea1d5b in Poco::Net::SocketImpl::receiveBytes(void*, int, int) ()

# 11 0x000055dc6be5afaa in DB::ReadBufferFromPocoSocket::nextImpl() ()

# 12 0x000055dc6b6e676f in DB::Connection::receivePacket() ()

# 13 0x000055dc6b6f69ae in DB::MultiplexedConnections::receivePacket() ()

# 14 0x000055dc6b1a8396 in DB::RemoteBlockInputStream::readImpl() ()

# 15 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 16 0x000055dc6b3036ac in DB::ParallelInputsProcessor<DB::UnionBlockInputStream::Handler>::loop(unsigned long) ()

# 17 0x000055dc6b303d95 in DB::ParallelInputsProcessor<DB::UnionBlockInputStream::Handler>::thread(std::shared_ptr<DB::ThreadGroupStatus>, unsigned long) ()

# 18 0x000055dc6b30470d in _ZZN20ThreadFromGlobalPoolC4IMN2DB23ParallelInputsProcessorINS1_21UnionBlockInputStream7HandlerEEEFvSt10shared_ptrINS1_17ThreadGroupStatusEEmEJPS5_S8_RmEEEOT_DpOT0_ENKUlvE_clEv ()

# 19 0x000055dc6809338c in ThreadPoolImpl<std::thread>::worker(std::_List_iterator<std::thread>) ()

# 20 0x000055dc6dd01b60 in ?? ()

# 21 0x00007f89a8b8ddd5 in start_thread () from /lib64/libpthread.so.0

# 22 0x00007f89a84ab02d in clone () from /lib64/libc.so.6

Thread 1171 (Thread 0x7f88881ef700 (LWP 18453)):

# 0  0x00007f89a8b944ed in __lll_lock_wait () from /lib64/libpthread.so.0

# 1  0x00007f89a8b910e2 in pthread_rwlock_rdlock () from /lib64/libpthread.so.0

# 2  0x000055dc6dd3c87f in ?? ()

# 3  0x000055dc6dd35393 in unw_step ()

# 4  0x000055dc6dd354b0 in unw_backtrace ()

# 5  0x000055dc68058221 in StackTrace::StackTrace(ucontext_t const&) ()

# 6  0x000055dc6806c91e in ?? ()

# 7  <signal handler called>

# 8  0x00007f89a8b91963 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0

# 9  0x000055dc6dc8dc0c in std::condition_variable::wait(std::unique_lock<std::mutex>&) ()

# 10 0x000055dc6d580c63 in Poco::Semaphore::wait() ()

# 11 0x000055dc6b304da6 in DB::UnionBlockInputStream::readImpl() ()

# 12 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 13 0x000055dc6b940442 in DB::Aggregator::mergeStream(std::shared_ptr<DB::IBlockInputStream> const&, DB::AggregatedDataVariants&, unsigned long) ()

# 14 0x000055dc6b8d7a5a in DB::MergingAggregatedBlockInputStream::readImpl() ()

# 15 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 16 0x000055dc6b8b81ef in DB::ExpressionBlockInputStream::readImpl() ()

# 17 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 18 0x000055dc6b8b81ef in DB::ExpressionBlockInputStream::readImpl() ()

# 19 0x000055dc6b191637 in DB::IBlockInputStream::read() ()

# 20 0x000055dc6b18a15b in DB::AsynchronousBlockInputStream::calculate() ()

# 21 0x000055dc6b18a520 in ?? ()

# 22 0x000055dc680958de in ThreadPoolImpl<ThreadFromGlobalPool>::worker(std::_List_iterator<ThreadFromGlobalPool>) ()

# 23 0x000055dc68095eee in _ZZN20ThreadFromGlobalPoolC4IZN14ThreadPoolImplIS_E12scheduleImplIvEET_St8functionIFvvEEiSt8optionalImEEUlvE1_JEEEOS4_DpOT0_ENKUlvE_clEv ()

# 24 0x000055dc6809338c in ThreadPoolImpl<std::thread>::worker(std::_List_iterator<std::thread>) ()

# 25 0x000055dc6dd01b60 in ?? ()

# 26 0x00007f89a8b8ddd5 in start_thread () from /lib64/libpthread.so.0

# 27 0x00007f89a84ab02d in clone () from /lib64/libc.so.6

你知道是什么导致了僵局吗?为什么clickhouse在阅读时被锁定?并发性似乎不高。

cunj1qz1

cunj1qz11#

很可能你碰到了那个虫子https://github.com/clickhouse/clickhouse/issues/7383
它是在19.14.10或更新版本中修复的。

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