net.sourceforge.ondex.core.DataSource.getId()方法的使用及代码示例

x33g5p2x  于2022-01-18 转载在 其他  
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本文整理了Java中net.sourceforge.ondex.core.DataSource.getId()方法的一些代码示例，展示了DataSource.getId()的具体用法。这些代码示例主要来源于Github/Stackoverflow/Maven等平台，是从一些精选项目中提取出来的代码，具有较强的参考意义，能在一定程度帮忙到你。DataSource.getId()方法的具体详情如下：
包路径：net.sourceforge.ondex.core.DataSource
类名称：DataSource
方法名：getId

DataSource.getId介绍

暂无

代码示例

代码示例来源：origin: net.sourceforge.ondex.apps/ovtk2

  1. @Override
  2.   public int compare(DataSource o1, DataSource o2) {
  3.     return o1.getId().compareToIgnoreCase(o2.getId());
  4.   }
  5. });

代码示例来源：origin: net.sourceforge.ondex.apps/ovtk2

  1. /**
  2.  * Returns node color for a given DataSource.
  3.  * 
  4.  * @param ds
  5.  *            DataSource
  6.  * @return Color
  7.  */
  8. public static Color getColorForDataSource(DataSource ds) {
  9.   String key = "DataSource.Color." + ds.getId();
  10.   if (visual.getProperty(key) != null) {
  11.     return convertToColor(visual.getProperty(key));
  12.   }
  13.   return defaultColor;
  14. }

代码示例来源：origin: net.sourceforge.ondex.modules/rdf

  1. public static String dataSourceToUri(String graphUri, DataSource dataSource) {
  2.   return toUri(graphUri, "cv", dataSource.getId());
  3. }
  4. public static String ccToUri(String graphUri, ConceptClass cc) {

代码示例来源：origin: net.sourceforge.ondex.apps/ovtk2

  1. /**
  2.  * Returns a JLabel for the data source
  3.  */
  4. @Override
  5. public Object getElementAt(int index) {
  6.   JLabel label = null;
  7.   if (index > -1) {
  8.     DataSource dataSource = dataSources.get(index);
  9.     String name = dataSource.getFullname();
  10.     if (name.trim().length() == 0)
  11.       name = dataSource.getId();
  12.     label = new JLabel(name);
  13.     label.setName(dataSource.getId());
  14.     label.setToolTipText("(" + dataSource.getId() + ") " + dataSource.getDescription());
  15.   }
  16.   return label;
  17. }

代码示例来源：origin: net.sourceforge.ondex.modules/tab-tools

  1. public String getValue(ONDEXEntity cOrr) throws InvalidOndexEntityException {
  2.   if(AbstractConcept.class.isAssignableFrom(cOrr.getClass())){
  3.     return ((ONDEXConcept)cOrr).getElementOf().getId();
  4.   }
  5.   throw new InvalidOndexEntityException(cOrr.getClass()+": is not an Ondex class for which cv is known");
  6. }

代码示例来源：origin: net.sourceforge.ondex.core/sql

  1. @Override
  2. public Set<ONDEXConcept> getConceptsOfDataSource(DataSource dataSource) {
  3.   Set<Integer> is = new HashSet<Integer>();
  4.   try {
  5.     PreparedStatement getCofDataSource = conn
  6.         .prepareStatement("select id from concept where sid = ? and DataSource = ?");
  7.     getCofDataSource.setLong(1, sid);
  8.     getCofDataSource.setString(2, dataSource.getId());
  9.     ResultSet rs = getCofDataSource.executeQuery();
  10.     while (rs.next()) {
  11.       is.add(rs.getInt(1));
  12.     }
  13.     rs.close();
  14.     getCofDataSource.close();
  15.   } catch (SQLException e) {
  16.     // TODO Auto-generated catch block
  17.     e.printStackTrace();
  18.   }
  19.   return BitSetFunctions.create(this, ONDEXConcept.class, is);
  20. }

代码示例来源：origin: net.sourceforge.ondex.modules/json

  1. /**
  2.  * Generate metadata for Data Source.
  3.  * @param ds
  4.  *            A Data Source (from the Ondex API).
  5.  * @return JSONObject
  6.  *            JSONObject containing information about the Data Source.
  7.  */
  8. private JSONObject buildDataSource(DataSource ds) {
  9.  JSONObject dsJson= new JSONObject();
  10.   dsJson.put(JSONAttributeNames.ID, ds.getId());
  11.  dsJson.put(JSONAttributeNames.FULLNAME, ds.getFullname());
  12.  dsJson.put(JSONAttributeNames.DESCRIPTION, ds.getDescription());
  13.  return dsJson;
  14. }

代码示例来源：origin: net.sourceforge.ondex.modules/generic

  1. @Override
  2. public void start() {
  3.   for (DataSource dataSource : graph.getMetaData().getDataSources()) {
  4.     Set<ONDEXConcept> concepts = graph.getConceptsOfDataSource(dataSource);
  5.     System.out.println("Data source C.V. id\tNumber of instances");
  6.     if (concepts.size() > 0) {
  7.       System.out.println(dataSource.getId() + "\t" + concepts.size());
  8.     }
  9.   }
  10. }

代码示例来源：origin: net.sourceforge.ondex.core/sql

  1. @Override
  2. public boolean deleteConceptAccession(String accession,
  3.     DataSource elementOf) {
  4.   
  5.   try {
  6.     PreparedStatement deleteCA = sg.getConnection().prepareStatement("delete from conceptaccession where (sid,id) = (?,?) and accession = ? and DataSource = ?");
  7.     deleteCA.setLong(1, getSID());
  8.     deleteCA.setInt(2, id);
  9.     deleteCA.setString(3, accession);
  10.     deleteCA.setString(4, elementOf.getId());
  11.     
  12.     deleteCA.execute();
  13.     deleteCA.close();
  14.     
  15.     return true;
  16.   } catch (SQLException e) {
  17.     // TODO Auto-generated catch block
  18.     e.printStackTrace();
  19.   }
  20.   return false;
  21.   
  22. }

代码示例来源：origin: net.sourceforge.ondex.apps/ovtk2

  1. private void step() {
  2.     boolean match = false;
  3.     next = null;
  4.     List<String> ofInterest = new ArrayList<String>();
  5.     while (!match && view.hasNext()) {
  6.       ONDEXRelation r = view.next();
  7.       String[] cCvs = arrAnd(r.getFromConcept().getElementOf().getId().split(":"), r.getToConcept().getElementOf().getId().split(":"), validArgs);
  8.       if (cCvs.length > 0) {
  9.         match = true;
  10.         next = cCvs;
  11.       }
  12.     }
  13.   }
  14. }

代码示例来源：origin: net.sourceforge.ondex.apps/ovtk2

  1. /**
  2.  * 
  3.  * @param conceptAccessions
  4.  * @return
  5.  */
  6. private static final String getAccessionOfCV(Set<ConceptAccession> conceptAccessions, String cv) {
  7.   for (ConceptAccession acc : conceptAccessions) {
  8.     if (acc.getElementOf().getId().equals(cv)) {
  9.       return acc.getAccession();
  10.     }
  11.   }
  12.   return null;
  13. }

代码示例来源：origin: net.sourceforge.ondex.core/berkeley

  1. @Override
  2. protected boolean removeConceptAccession(String accession,
  3.     DataSource elementOf) {
  4.   return berkeley.deleteFromDatabase(ConceptAccession.class,
  5.       new BerkeleyIntegerName(id, accession + elementOf.getId()));
  6. }

代码示例来源：origin: net.sourceforge.ondex.modules/clustering

  1. @Override
  2.   public int compare(ConceptAccession o1, ConceptAccession o2) {
  3.     if (o1.getElementOf().equals(o2.getElementOf()))
  4.       return o1.getAccession().compareTo(o2.getAccession());
  5.     return o1.getElementOf().getId()
  6.         .compareTo(o2.getElementOf().getId());
  7.   }
  8. });

代码示例来源：origin: net.sourceforge.ondex.core/berkeley

  1. @Override
  2. protected DataSource storeDataSource(DataSource dataSource) {
  3.   BerkeleyDataSource bcv = BerkeleyDataSource.FACTORY.convert(dataSource);
  4.   if (berkeley.existsInDatabase(DataSource.class, dataSource.getId())) {
  5.     berkeley.fireEventOccurred(new DuplicatedEntryEvent(
  6.         Config.properties
  7.             .getProperty("persistent.BerkeleyONDEXGraphMetaData.DuplicatedDataSource")
  8.             + dataSource.getId(),
  9.         "[BerkeleyONDEXGraphMetaData - storeDataSource]"));
  10.   } else {
  11.     berkeley.insertIntoDatabase(DataSource.class, dataSource.getId(),
  12.         bcv.serialise());
  13.   }
  14.   bcv.setUpdateListener(this);
  15.   return bcv;
  16. }

代码示例来源：origin: net.sourceforge.ondex.webservices/soapgraph

  1. @Override
  2. public ConceptAccession createConceptAccession(String accession,
  3.     DataSource elementOf, boolean ambiguous) {
  4.   try {
  5.     soapGraph.createConceptAccession(graphId, id, new Holder<String>(
  6.         accession), elementOf.getId(), Boolean.valueOf(ambiguous));
  7.     return new SOAPConceptAccession(parent, id, accession,
  8.         elementOf.getId());
  9.   } catch (WebserviceException_Exception e) {
  10.     parent.fireActionEvent(e, e.getMessage());
  11.     e.printStackTrace();
  12.   }
  13.   return null;
  14. }

代码示例来源：origin: net.sourceforge.ondex.webservices/soapgraph

  1. @Override
  2. public ConceptAccession getConceptAccession(String accession,
  3.     DataSource elementOf) {
  4.   try {
  5.     if (soapGraph.getConceptAccession(graphId, id, accession,
  6.         elementOf.getId()) != null)
  7.       return new SOAPConceptAccession(parent, id, accession,
  8.           elementOf.getId());
  9.   } catch (WebserviceException_Exception e) {
  10.     parent.fireActionEvent(e, e.getMessage());
  11.     e.printStackTrace();
  12.   }
  13.   return null;
  14. }

代码示例来源：origin: net.sourceforge.ondex.apps/ovtk2

  1. @Override
  2. public int compare(ConceptAccession o1, ConceptAccession o2) {
  3.   // within same DataSource sort first by ambiguity, than by accession
  4.   if (o1.getElementOf().equals(o2.getElementOf())) {
  5.     if (!o1.isAmbiguous() && o2.isAmbiguous())
  6.       return -1;
  7.     else if (o1.isAmbiguous() && !o2.isAmbiguous())
  8.       return 1;
  9.     else
  10.       return o1.getAccession().compareTo(o2.getAccession());
  11.   } else {
  12.     // sort according to DataSource
  13.     return o1.getElementOf().getId().compareTo(o2.getElementOf().getId());
  14.   }
  15. }

代码示例来源：origin: net.sourceforge.ondex.webservices/soapgraph

  1. @Override
  2. public boolean deleteConceptAccession(String accession, DataSource elementOf) {
  3.   try {
  4.     return soapGraph.deleteConceptAccession(graphId, id, accession,
  5.         elementOf.getId());
  6.   } catch (WebserviceException_Exception e) {
  7.     parent.fireActionEvent(e, e.getMessage());
  8.     e.printStackTrace();
  9.   }
  10.   return false;
  11. }

代码示例来源：origin: net.sourceforge.ondex.modules/generic

  1. public void start() {
  2.   ONDEXGraphMetaData metadata = graph.getMetaData();
  3.   for (ConceptClass cc : metadata.getConceptClasses()) {
  4.     System.out.println("ConceptClass " + cc.getId() + " " + cc.getFullname());
  5.     System.out.println("\tConcepts = " + graph.getConceptsOfConceptClass(cc).size());
  6.   }
  7.   for (DataSource dataSource : metadata.getDataSources()) {
  8.     System.out.println("DataSource " + dataSource.getId() + " " + dataSource.getFullname());
  9.     System.out.println("\tConcepts = " + graph.getConceptsOfDataSource(dataSource).size());
  10.   }
  11.   for (AttributeName att : metadata.getAttributeNames()) {
  12.     System.out.println("AttributeName " + att.getId() + " " + att.getFullname());
  13.     System.out.println("\tConcepts = " + graph.getConceptsOfAttributeName(att).size());
  14.     System.out.println("\tRelations = " + graph.getRelationsOfAttributeName(att).size());
  15.   }
  16.   for (RelationType rt : metadata.getRelationTypes()) {
  17.     System.out.println("RelationType " + rt.getId() + " " + rt.getFullname());
  18.     System.out.println("\tRelations = " + graph.getRelationsOfRelationType(rt).size());
  19.   }
  20. }

代码示例来源：origin: net.sourceforge.ondex.core/berkeley

  1. @Override
  2. protected ConceptAccession retrieveConceptAccession(String accession,
  3.     DataSource elementOf) {
  4.   byte[] array = berkeley.getFromDatabase(ConceptAccession.class,
  5.       new BerkeleyIntegerName(id, accession + elementOf.getId()));
  6.   if (array != null) {
  7.     BerkeleyConceptAccession conceptAccession = BerkeleyConceptAccession
  8.         .deserialise(berkeley.getAbstractONDEXGraph(), array);
  9.     array = null;
  10.     conceptAccession.setUpdateListener(this);
  11.     return conceptAccession;
  12.   }
  13.   return null;
  14. }

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